PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast10G036500.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 224aa    MW: 25017.5 Da    PI: 6.3595
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast10G036500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.42.5e-14611839128
                 NAM   9 PtdeelvveyLkkkvegkkleleevikevdiykv....ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                         Ptd elv ++L++  ++ ++  e +  +vd+++v    +P +Lp  + k+++  +y+F         g + n  t +gyW +    +++ +
  Brast10G036500.1.p  61 PTDVELVENHLRPAFQRLPVAKEIIRGRVDVNTVlpfmNPFKLPgVEGKEGRIGMYYFQLG-----FGYKDNLETPDGYWAKRDWGRAIEV 146
                         9******************888454556688775333488999933444444488999875.....45678899*******9988888877 PP

                 NAM  95 k.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +     ++  +g+kkt+ f+k   +k +kt+W+m+ y+l
  Brast10G036500.1.p 147 TkgdrgGTDIIGIKKTFDFHKY--KKDTKTKWTMNIYSL 183
                         7456555555**********54..5556*******9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.26353201IPR003441NAC domain
SuperFamilySSF1019411.11E-1860201IPR003441NAC domain
PfamPF023653.7E-1061183IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MSIDLPPSSV VEESQARPGG DFVSSHLSLV PPPLPAQTDL PALTVEQELQ AWELPDLPSI  60
PTDVELVENH LRPAFQRLPV AKEIIRGRVD VNTVLPFMNP FKLPGVEGKE GRIGMYYFQL  120
GFGYKDNLET PDGYWAKRDW GRAIEVTKGD RGGTDIIGIK KTFDFHKYKK DTKTKWTMNI  180
YSLVSSARVQ DLLVLCHVFE QDSAGYDSRP KCPTFHQGKC NGN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003578557.15e-63PREDICTED: uncharacterized protein LOC100842183
TrEMBLA0A0Q3HDB11e-62A0A0Q3HDB1_BRADI; Uncharacterized protein
TrEMBLI1IH576e-63I1IH57_BRADI; Uncharacterized protein
TrEMBLI1IH604e-63I1IH60_BRADI; Uncharacterized protein
STRINGBRADI4G03620.12e-62(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1859089
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39610.12e-11NAC domain containing protein 6